TSS: Hg 102993.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=5194 | |||
|end=133370874 | |||
|end_of_center_position=133370867 | |||
|entrez_id=6836 | |entrez_id=6836 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000148248 | |nearest_ensembl=ENSG00000148248 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_033161 | ||
|nearest_refseq=NM_033161 | |nearest_refseq=NM_033161 | ||
|nearest_unigene=Hs.512465 | |nearest_unigene=Hs.512465 | ||
|num_trans=0 | |||
|species=human | |||
|start=133370858 | |||
|start_of_center_position=133370866 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102993.1 | |tss_id=hg_102993.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 17:16, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 5194 |
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Nearest PromoterID: | NM_033161 |
Entrez ID: | 6836 |
Nearest Unigene: | Hs.512465 |
Nearest Refseq: | NM_033161 |
Nearest Ensembl: | ENSG00000148248 |
Gene Name: | SURF4 |
Gene Alias: | ERV29 |
Gene Description: | surfeit 4 |
Gene Type: | protein-coding |
CpG%: | 0.02 |
GC%: | 0.532338 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |