TSS: Hg 103039.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=104140 |entrez_id=7410 |gc_percent=0.641791 |gene_alias=VAV-2 |gene_description=vav guanine nucleotide exchange factor 2 |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=NA | |||
|distance_to_tss=104140 | |distance_to_tss=104140 | ||
|end=133888187 | |||
|end_of_center_position=133888185 | |||
|entrez_id=7410 | |entrez_id=7410 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000160293 | |nearest_ensembl=ENSG00000160293 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001134398 | ||
|nearest_refseq=NM_003371 | |nearest_refseq=NM_003371 | ||
|nearest_unigene=Hs.369921 | |nearest_unigene=Hs.369921 | ||
|num_trans=0 | |||
|species=human | |||
|start=133888181 | |||
|start_of_center_position=133888184 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_103039.1 | |tss_id=hg_103039.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 17:17, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 104140 |
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| Nearest PromoterID: | NM_001134398 |
| Entrez ID: | 7410 |
| Nearest Unigene: | Hs.369921 |
| Nearest Refseq: | NM_003371 |
| Nearest Ensembl: | ENSG00000160293 |
| Gene Name: | VAV2 |
| Gene Alias: | VAV-2 |
| Gene Description: | vav guanine nucleotide exchange factor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |