TSS: Hg 100101.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-230033 |entrez_id=100129385 |gc_percent=0.427861 |gene_alias=Em:AL513424.1 |gene_description=chromosome 9 open reading frame 9...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=LF355499:-8 MA591076:-8 LF355500:-119 MA591077:-119 | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance_to_tss=- | |distance=-8 | ||
|entrez_id= | |distance_to_tss=-220468 | ||
|end=16506351 | |||
|end_of_center_position=16506347 | |||
|entrez_id=111216284 | |||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
|gene_alias= | |gene_alias=- | ||
|gene_description= | |gene_description=BNC2 antisense RNA 1 | ||
|gene_name= | |gene_name=BNC2-AS1 | ||
|gene_type= | |gene_type=ncRNA | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000234779 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_151723 | ||
|nearest_refseq= | |nearest_refseq=NR_151723 | ||
|nearest_unigene=Hs. | |nearest_unigene=Hs.609218 | ||
|num_trans=4 | |||
|species=human | |||
|start=16506341 | |||
|start_of_center_position=16506346 | |||
|strand=- | |||
|transcript_name=LF355499 MA591076 | |||
|tss_classification=yes | |||
|tss_id=hg_100101.1 | |tss_id=hg_100101.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 17:37, 12 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -220468 |
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| Nearest PromoterID: | NR_151723 |
| Entrez ID: | 111216284 |
| Nearest Unigene: | Hs.609218 |
| Nearest Refseq: | NR_151723 |
| Nearest Ensembl: | ENSG00000234779 |
| Gene Name: | BNC2-AS1 |
| Gene Alias: | - |
| Gene Description: | BNC2 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |