TSS: Mm 78129.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000066387.4:0 NM_001030290:0 uc009ojh.1:0 BC148618:0 BC153184:0 |chr=chr9 |cpg_percent=0.03 |distance=0 |distance_to_tss=-6 |end=20818506 |entr...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=MGI:2685028 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=4 | ||
|end=20818506 | |end=20818506 | ||
|end_of_center_position=20818499 | |||
|entrez_id=235033 | |entrez_id=235033 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
|gene_alias=Gm182 | |gene_alias=Gm182{{!}}prRDH | ||
|gene_description=retinol dehydrogenase 8 | |gene_description=retinol dehydrogenase 8 | ||
|gene_id=235033 | |gene_id=235033 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001030290 | |nearest_refseq=NM_001030290 | ||
|nearest_unigene=Mm.297661 | |nearest_unigene=Mm.297661 | ||
|num_trans= | |num_trans=235033 | ||
|prRDH= | |||
|species=mouse | |species=mouse | ||
|start=20818490 | |start=20818490 | ||
|start_of_center_position=20818498 | |||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000066387. | |transcript_name=ENSMUST00000066387.5 BC148618 BC153184 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_78129.1 | |tss_id=mm_78129.1 | ||
Latest revision as of 11:40, 28 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 4 |
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| Nearest PromoterID: | NM_001030290 |
| Entrez ID: | 235033 |
| Nearest Unigene: | Mm.297661 |
| Nearest Refseq: | NM_001030290 |
| Nearest Ensembl: | ENSMUSG00000053773 |
| Gene Name: | retinol dehydrogenase 8 |
| Gene Alias: | Gm182|prRDH |
| Gene Description: | retinol dehydrogenase 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.