TSS: Mm 78130.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |chr=chr9 |cpg_percent=0.005 |distance= |distance_to_tss=-1518 |end=20867135 |entrez_id=319278 |gc_percent=0.457711 |gene_alias=RyDEN |gene_description=RIKEN cDNA...") |
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |distance=NA | ||
|distance_to_tss=-1518 | |distance_to_tss=-1518 | ||
|end=20867135 | |end=20867135 | ||
|end_of_center_position=20867124 | |||
|entrez_id=319278 | |entrez_id=319278 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
|gene_alias=RyDEN | |gene_alias=A230050P20Rik{{!}}RyDEN | ||
|gene_description= | |gene_description=shiftless antiviral inhibitor of ribosomal frameshifting | ||
|gene_name= | |gene_name=Shfl | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000038884 | |nearest_ensembl=ENSMUSG00000038884 | ||
| Line 18: | Line 19: | ||
|species=mouse | |species=mouse | ||
|start=20867112 | |start=20867112 | ||
|start_of_center_position=20867123 | |||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 19:52, 21 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -1518 |
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| Nearest PromoterID: | NM_175687 |
| Entrez ID: | 319278 |
| Nearest Unigene: | Mm.249932 |
| Nearest Refseq: | NM_175687 |
| Nearest Ensembl: | ENSMUSG00000038884 |
| Gene Name: | Shfl |
| Gene Alias: | A230050P20Rik|RyDEN |
| Gene Description: | shiftless antiviral inhibitor of ribosomal frameshifting |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |