TSS: Mm 78679.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |chr=chr9 |cpg_percent=0.02 |distance= |distance_to_tss=-16326 |end=40784956 |entrez_id=15481 |gc_percent=0.38806 |gene_alias=2410008N15Rik|Hsc70|Hsc71|Hsc73|Hsp73...") |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Hsc70= | |||
|Hsc71= | |||
|Hsc73= | |||
|Hsp73= | |||
|Hspa10= | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance= | |distance=NA | ||
|distance_to_tss=- | |distance_to_tss=-16329 | ||
|end=40784956 | |end=40784956 | ||
|end_of_center_position=40784947 | |||
|entrez_id=15481 | |entrez_id=15481 | ||
|gc_percent=0.38806 | |gc_percent=0.38806 | ||
|gene_alias=2410008N15Rik | |gene_alias=2410008N15Rik{{!}}Hsc70{{!}}Hsc71{{!}}Hsc73{{!}}Hsp73{{!}}Hspa10 | ||
|gene_description=heat shock protein 8 | |gene_description=heat shock protein 8 | ||
|gene_name=Hspa8 | |gene_name=Hspa8 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000015656 | |nearest_ensembl=ENSMUSG00000015656 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001364480 | ||
|nearest_refseq=NM_031165 | |nearest_refseq=NM_031165 | ||
|nearest_unigene=Mm.290774 | |nearest_unigene=Mm.290774 | ||
Line 18: | Line 24: | ||
|species=mouse | |species=mouse | ||
|start=40784937 | |start=40784937 | ||
|start_of_center_position=40784946 | |||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= |
Latest revision as of 20:04, 21 June 2021
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | -16329 |
---|---|
Nearest PromoterID: | NM_001364480 |
Entrez ID: | 15481 |
Nearest Unigene: | Mm.290774 |
Nearest Refseq: | NM_031165 |
Nearest Ensembl: | ENSMUSG00000015656 |
Gene Name: | Hspa8 |
Gene Alias: | 2410008N15Rik|Hsc70|Hsc71|Hsc73|Hsp73|Hspa10 |
Gene Description: | heat shock protein 8 |
Gene Type: | protein-coding |
CpG%: | 0.02 |
GC%: | 0.38806 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |