TSS: Mm 79937.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK076798:0 |chr=chr9 |cpg_percent=0.015 |distance=0 |distance_to_tss=6128 |end=65896468 |entrez_id=68026 |gc_percent=0.487562 |gene_alias=2810417H13Rik|...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |AA409629= | ||
|Ns5apt9= | |||
|Ns5atp9= | |||
|PAF15= | |||
|Paf= | |||
|all_trans=MGI:2442964 | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=6128 | |distance_to_tss=6128 | ||
|end=65896468 | |end=65896468 | ||
|end_of_center_position=65896451 | |||
|entrez_id=68026 | |entrez_id=68026 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
|gene_alias=2810417H13Rik | |gene_alias=2810417H13Rik{{!}}AA409629{{!}}Ns5apt9{{!}}Ns5atp9{{!}}PAF15{{!}}Paf{{!}}mKIAA0101{{!}}p15(PAF) | ||
|gene_description=PCNA clamp associated factor | |gene_description=PCNA clamp associated factor | ||
|gene_id=319910 | |gene_id=319910 | ||
| Line 17: | Line 23: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:2442964 | |hgnc_mgi_id=MGI:2442964 | ||
|mKIAA0101= | |||
|nearest_ensembl=ENSMUSG00000040204 | |nearest_ensembl=ENSMUSG00000040204 | ||
|nearest_promoter_id=NM_026515 | |nearest_promoter_id=NM_026515 | ||
|nearest_refseq=NM_026515 | |nearest_refseq=NM_026515 | ||
|nearest_unigene=Mm.351273 | |nearest_unigene=Mm.351273 | ||
|num_trans= | |num_trans=319910 | ||
|p15(PAF)= | |||
|species=mouse | |species=mouse | ||
|start=65896433 | |start=65896433 | ||
|start_of_center_position=65896450 | |||
|strand=+ | |strand=+ | ||
|transcript_name=AK076798 | |transcript_name=AK076798 | ||
Latest revision as of 12:18, 28 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 6128 |
|---|---|
| Nearest PromoterID: | NM_026515 |
| Entrez ID: | 68026 |
| Nearest Unigene: | Mm.351273 |
| Nearest Refseq: | NM_026515 |
| Nearest Ensembl: | ENSMUSG00000040204 |
| Gene Name: | RIKEN cDNA D030028M11 gene |
| Gene Alias: | 2810417H13Rik|AA409629|Ns5apt9|Ns5atp9|PAF15|Paf|mKIAA0101|p15(PAF) |
| Gene Description: | PCNA clamp associated factor |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.