TSS: Hg 100135.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=-1179 |entrez_id=54796 |gc_percent=0.552239 |gene_alias=BSN2 |gene_description=basonuclin 2 |gene_name=BNC2 |gene_type=protein-...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance_to_tss=- | |distance=NA | ||
|distance_to_tss=-1297 | |||
|end=16871971 | |||
|end_of_center_position=16871967 | |||
|entrez_id=54796 | |entrez_id=54796 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_017637 | |nearest_refseq=NM_017637 | ||
|nearest_unigene=Hs.656581 | |nearest_unigene=Hs.656581 | ||
|num_trans=0 | |||
|species=human | |||
|start=16871962 | |||
|start_of_center_position=16871966 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100135.1 | |tss_id=hg_100135.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 17:30, 11 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -1297 |
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| Nearest PromoterID: | NM_001317940 |
| Entrez ID: | 54796 |
| Nearest Unigene: | Hs.656581 |
| Nearest Refseq: | NM_017637 |
| Nearest Ensembl: | ENSG00000173068 |
| Gene Name: | BNC2 |
| Gene Alias: | BSN2 |
| Gene Description: | basonuclin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |