TSS: Hg 100138.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=-36561 |entrez_id=92949 |gc_percent=0.457711 |gene_alias=ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN |gene_description=ADAMTS like 1 |gene_n...") |
No edit summary |
||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|ADAMTSR1= | |||
|C9orf94= | |||
|PUNCTIN= | |||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance_to_tss=- | |distance=NA | ||
|distance_to_tss=-36633 | |||
|end=18437537 | |||
|end_of_center_position=18437521 | |||
|entrez_id=92949 | |entrez_id=92949 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
|gene_alias=ADAMTSL-1 | |gene_alias=ADAMTSL-1{{!}}ADAMTSR1{{!}}C9orf94{{!}}PUNCTIN | ||
|gene_description=ADAMTS like 1 | |gene_description=ADAMTS like 1 | ||
|gene_name=ADAMTSL1 | |gene_name=ADAMTSL1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000178031 | |nearest_ensembl=ENSG00000178031 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001040272 | ||
|nearest_refseq=NM_052866 | |nearest_refseq=NM_052866 | ||
|nearest_unigene=Hs.741483 | |nearest_unigene=Hs.741483 | ||
|num_trans=0 | |||
|species=human | |||
|start=18437503 | |||
|start_of_center_position=18437520 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100138.1 | |tss_id=hg_100138.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:10, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | -36633 |
|---|---|
| Nearest PromoterID: | NM_001040272 |
| Entrez ID: | 92949 |
| Nearest Unigene: | Hs.741483 |
| Nearest Refseq: | NM_052866 |
| Nearest Ensembl: | ENSG00000178031 |
| Gene Name: | ADAMTSL1 |
| Gene Alias: | ADAMTSL-1|ADAMTSR1|C9orf94|PUNCTIN |
| Gene Description: | ADAMTS like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |