TSS: Hg 100141.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|FAM154A= | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=39623 | |||
|end=18993588 | |||
|end_of_center_position=18993586 | |||
|entrez_id=158297 | |entrez_id=158297 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
|gene_alias=C9orf138 | |gene_alias=C9orf138{{!}}FAM154A | ||
|gene_description=stabilizer of axonemal microtubules 1 | |gene_description=stabilizer of axonemal microtubules 1 | ||
|gene_name=SAXO1 | |gene_name=SAXO1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000155875 | |nearest_ensembl=ENSG00000155875 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001287050 | ||
|nearest_refseq=NM_153707 | |nearest_refseq=NM_153707 | ||
|nearest_unigene=Hs.731593 | |nearest_unigene=Hs.731593 | ||
|num_trans=0 | |||
|species=human | |||
|start=18993583 | |||
|start_of_center_position=18993585 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100141.1 | |tss_id=hg_100141.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:11, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 39623 |
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Nearest PromoterID: | NM_001287050 |
Entrez ID: | 158297 |
Nearest Unigene: | Hs.731593 |
Nearest Refseq: | NM_153707 |
Nearest Ensembl: | ENSG00000155875 |
Gene Name: | SAXO1 |
Gene Alias: | C9orf138|FAM154A |
Gene Description: | stabilizer of axonemal microtubules 1 |
Gene Type: | protein-coding |
CpG%: | 0.01 |
GC%: | 0.467662 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |