TSS: Mm 88229.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK046110:0 |chr=chr10 |cpg_percent=0.18 |distance=0 |distance_to_tss=-534 |end=70599836 |entrez_id=70911 |gc_percent=0.766169 |gene_alias=4921522K17Rik|...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |AI267048= | ||
|all_trans=MGI:2143903 | |||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.18 | |cpg_percent=0.18 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-534 | |distance_to_tss=-534 | ||
|end=70599836 | |end=70599836 | ||
|end_of_center_position=70599826 | |||
|entrez_id=70911 | |entrez_id=70911 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
|gene_alias=4921522K17Rik | |gene_alias=4921522K17Rik{{!}}AI267048 | ||
|gene_description=phytanoyl-CoA hydroxylase interacting protein-like | |gene_description=phytanoyl-CoA hydroxylase interacting protein-like | ||
|gene_id=103517 | |gene_id=103517 | ||
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|nearest_refseq=NM_178621 | |nearest_refseq=NM_178621 | ||
|nearest_unigene=Mm.19825 | |nearest_unigene=Mm.19825 | ||
|num_trans= | |num_trans=103517 | ||
|species=mouse | |species=mouse | ||
|start=70599814 | |start=70599814 | ||
|start_of_center_position=70599825 | |||
|strand=+ | |strand=+ | ||
|transcript_name=AK046110 | |transcript_name=AK046110 | ||
Latest revision as of 15:21, 28 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -534 |
|---|---|
| Nearest PromoterID: | NM_178621 |
| Entrez ID: | 70911 |
| Nearest Unigene: | Mm.19825 |
| Nearest Refseq: | NM_178621 |
| Nearest Ensembl: | ENSMUSG00000037747 |
| Gene Name: | expressed sequence BB187676 |
| Gene Alias: | 4921522K17Rik|AI267048 |
| Gene Description: | phytanoyl-CoA hydroxylase interacting protein-like |
| Gene Type: | protein-coding |
| CpG%: | 0.18 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.