TSS: Mm 9820.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |5730505P19Rik= | ||
|D1Ertd578e= | |||
|Fbx28= | |||
|all_trans=MGI:1261890 | |||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=1 | |distance_to_tss=1 | ||
|end=182341625 | |end=182341625 | ||
|end_of_center_position=182341606 | |||
|entrez_id=67948 | |entrez_id=67948 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
|gene_alias=4833428J17Rik | |gene_alias=4833428J17Rik{{!}}5730505P19Rik{{!}}D1Ertd578e{{!}}Fbx28{{!}}mKIAA0483 | ||
|gene_description=F-box protein 28 | |gene_description=F-box protein 28 | ||
|gene_id=67948 | |gene_id=67948 | ||
| Line 17: | Line 21: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1261890 | |hgnc_mgi_id=MGI:1261890 | ||
|mKIAA0483= | |||
|nearest_ensembl=ENSMUSG00000047539 | |nearest_ensembl=ENSMUSG00000047539 | ||
|nearest_promoter_id=NM_175127 | |nearest_promoter_id=NM_175127 | ||
|nearest_refseq=NM_175127 | |nearest_refseq=NM_175127 | ||
|nearest_unigene=Mm.30737 | |nearest_unigene=Mm.30737 | ||
|num_trans= | |num_trans=67948 | ||
|species=mouse | |species=mouse | ||
|start=182341585 | |start=182341585 | ||
|start_of_center_position=182341605 | |||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000051431.9 ENSMUST00000192544.5 | |transcript_name=ENSMUST00000051431.9 ENSMUST00000192544.5 AK122295 BC094542 AK076211 AK077653 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_9820.1 | |tss_id=mm_9820.1 | ||
Latest revision as of 18:58, 28 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_175127 |
| Entrez ID: | 67948 |
| Nearest Unigene: | Mm.30737 |
| Nearest Refseq: | NM_175127 |
| Nearest Ensembl: | ENSMUSG00000047539 |
| Gene Name: | F-box protein 28 |
| Gene Alias: | 4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483 |
| Gene Description: | F-box protein 28 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.