TSS: Hg 100156.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|ADRP= | |||
|all_trans=AK094196:0 ENST00000434144.5:-8 ENST00000494753.1:-20 | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=0 | |||
|distance_to_tss=-21656 | |distance_to_tss=-21656 | ||
|end=19149270 | |||
|end_of_center_position=19149263 | |||
|entrez_id=123 | |entrez_id=123 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
|gene_alias=ADFP | |gene_alias=ADFP{{!}}ADRP | ||
|gene_description=perilipin 2 | |gene_description=perilipin 2 | ||
|gene_name=PLIN2 | |gene_name=PLIN2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000147872 | |nearest_ensembl=ENSG00000147872 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_038064 | ||
|nearest_refseq=NM_001122 | |nearest_refseq=NM_001122 | ||
|nearest_unigene=Hs.3416 | |nearest_unigene=Hs.3416 | ||
|num_trans=3 | |||
|species=human | |||
|start=19149254 | |||
|start_of_center_position=19149262 | |||
|strand=- | |||
|transcript_name=AK094196 | |||
|tss_classification=yes | |||
|tss_id=hg_100156.1 | |tss_id=hg_100156.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:11, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -21656 |
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| Nearest PromoterID: | NR_038064 |
| Entrez ID: | 123 |
| Nearest Unigene: | Hs.3416 |
| Nearest Refseq: | NM_001122 |
| Nearest Ensembl: | ENSG00000147872 |
| Gene Name: | PLIN2 |
| Gene Alias: | ADFP|ADRP |
| Gene Description: | perilipin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |