TSS: Hg 100159.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.04 |distance_to_tss=-691 |entrez_id=55667 |gc_percent=0.427861 |gene_alias=C9orf55|C9orf55B|RAB10GEF|bA513M16.3 |gene_description=DENN domain contai...") |
No edit summary |
||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|C9orf55B= | |||
|RAB10GEF= | |||
|bA513M16.3= | |||
|chr=chr9 | |||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance_to_tss=- | |distance=NA | ||
|distance_to_tss=-894 | |||
|end=19229808 | |||
|end_of_center_position=19229799 | |||
|entrez_id=55667 | |entrez_id=55667 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
|gene_alias=C9orf55 | |gene_alias=C9orf55{{!}}C9orf55B{{!}}RAB10GEF{{!}}bA513M16.3 | ||
|gene_description=DENN domain containing 4C | |gene_description=DENN domain containing 4C | ||
|gene_name=DENND4C | |gene_name=DENND4C | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_017925 | |nearest_refseq=NM_017925 | ||
|nearest_unigene=Hs.249591 | |nearest_unigene=Hs.249591 | ||
|num_trans=0 | |||
|species=human | |||
|start=19229789 | |||
|start_of_center_position=19229798 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_100159.1 | |tss_id=hg_100159.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:11, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | -894 |
|---|---|
| Nearest PromoterID: | NM_001330640 |
| Entrez ID: | 55667 |
| Nearest Unigene: | Hs.249591 |
| Nearest Refseq: | NM_017925 |
| Nearest Ensembl: | ENSG00000137145 |
| Gene Name: | DENND4C |
| Gene Alias: | C9orf55|C9orf55B|RAB10GEF|bA513M16.3 |
| Gene Description: | DENN domain containing 4C |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |