TSS: Hg 100178.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=91340 |entrez_id=25769 |gc_percent=0.308458 |gene_alias=NCKX2 |gene_description=solute carrier family 24 member 2 |gene_name=SLC24A...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=NA | |||
|distance_to_tss=91340 | |distance_to_tss=91340 | ||
|end=19695680 | |||
|end_of_center_position=19695679 | |||
|entrez_id=25769 | |entrez_id=25769 | ||
|gc_percent=0.308458 | |gc_percent=0.308458 | ||
| Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000155886 | |nearest_ensembl=ENSG00000155886 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001193288 | ||
|nearest_refseq=NM_020344 | |nearest_refseq=NM_020344 | ||
|nearest_unigene=Hs.283014 | |nearest_unigene=Hs.283014 | ||
|num_trans=0 | |||
|species=human | |||
|start=19695677 | |||
|start_of_center_position=19695678 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100178.1 | |tss_id=hg_100178.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 14:18, 14 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 91340 |
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| Nearest PromoterID: | NM_001193288 |
| Entrez ID: | 25769 |
| Nearest Unigene: | Hs.283014 |
| Nearest Refseq: | NM_020344 |
| Nearest Ensembl: | ENSG00000155886 |
| Gene Name: | SLC24A2 |
| Gene Alias: | NCKX2 |
| Gene Description: | solute carrier family 24 member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.308458 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |