TSS: Hg 118296.1: Difference between revisions
From referenceTSS
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|OR7E81P= | |OR7E81P= | ||
|OST021= | |OST021= | ||
|all_trans=AK123096:0 | |all_trans=ENST00000659225.1:0 NR_169525:0 AK123096:0 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 11: | Line 11: | ||
|distance_to_tss=-85144 | |distance_to_tss=-85144 | ||
|end=3477079 | |end=3477079 | ||
|end_of_center_position=3477059 | |||
|entrez_id=10821 | |entrez_id=10821 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
|gene_alias=HG1058 | |gene_alias=HG1058{{!}}OR11-3{{!}}OR7E58P{{!}}OR7E79P{{!}}OR7E81P{{!}}OST021 | ||
|gene_description=olfactory receptor family 7 subfamily E member 12 pseudogene | |gene_description=olfactory receptor family 7 subfamily E member 12 pseudogene | ||
|gene_name= | |gene_id=105376526 | ||
|gene_name=uncharacterized LOC105376526 | |||
|gene_source=EntrezGene:105376526 | |||
|gene_symbol=LOC105376526 | |||
|gene_synonyms= | |||
|gene_type=pseudo | |gene_type=pseudo | ||
|hgnc_mgi_id= | |||
|nearest_ensembl=ENSG00000189398 | |nearest_ensembl=ENSG00000189398 | ||
|nearest_promoter_id=NR_044999 | |nearest_promoter_id=NR_044999 | ||
|nearest_refseq=NR_044999 | |nearest_refseq=NR_044999 | ||
|nearest_unigene=Hs.637689 | |nearest_unigene=Hs.637689 | ||
|num_trans= | |num_trans=3 | ||
|species=human | |species=human | ||
|start=3477038 | |start=3477038 | ||
|start_of_center_position=3477058 | |||
|strand=- | |strand=- | ||
|transcript_name=AK123096 | |transcript_name=ENST00000659225.1 NR_169525.1 AK123096 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_118296.1 | |tss_id=hg_118296.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |||
}} | }} | ||
Latest revision as of 00:11, 20 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -85144 |
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| Nearest PromoterID: | NR_044999 |
| Entrez ID: | 10821 |
| Nearest Unigene: | Hs.637689 |
| Nearest Refseq: | NR_044999 |
| Nearest Ensembl: | ENSG00000189398 |
| Gene Name: | uncharacterized LOC105376526 |
| Gene Alias: | HG1058|OR11-3|OR7E58P|OR7E79P|OR7E81P|OST021 |
| Gene Description: | olfactory receptor family 7 subfamily E member 12 pseudogene |
| Gene Type: | pseudo |
| CpG%: | 0.035 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.