TSS: Hg 100207.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-18447 |entrez_id=3456 |gc_percent=0.402985 |gene_alias=IFB|IFF|IFN-beta|IFNB |gene_description=interferon beta 1 |gene_name=IFN...") |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|IFF= | |||
|IFN-beta= | |||
|IFNB= | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance_to_tss=- | |distance=NA | ||
|distance_to_tss=-18468 | |||
|end=21096420 | |||
|end_of_center_position=21096410 | |||
|entrez_id=3456 | |entrez_id=3456 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
|gene_alias=IFB | |gene_alias=IFB{{!}}IFF{{!}}IFN-beta{{!}}IFNB | ||
|gene_description=interferon beta 1 | |gene_description=interferon beta 1 | ||
|gene_name=IFNB1 | |gene_name=IFNB1 | ||
Line 12: | Line 19: | ||
|nearest_refseq=NM_002176 | |nearest_refseq=NM_002176 | ||
|nearest_unigene=Hs.93177 | |nearest_unigene=Hs.93177 | ||
|num_trans=0 | |||
|species=human | |||
|start=21096399 | |||
|start_of_center_position=21096409 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100207.1 | |tss_id=hg_100207.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:12, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | -18468 |
---|---|
Nearest PromoterID: | NM_002176 |
Entrez ID: | 3456 |
Nearest Unigene: | Hs.93177 |
Nearest Refseq: | NM_002176 |
Nearest Ensembl: | ENSG00000171855 |
Gene Name: | IFNB1 |
Gene Alias: | IFB|IFF|IFN-beta|IFNB |
Gene Description: | interferon beta 1 |
Gene Type: | protein-coding |
CpG%: | 0.01 |
GC%: | 0.402985 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |