TSS: Hg 100214.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|IFN= | |||
|IFN-ALPHA= | |||
|IFN-alphaD= | |||
|IFNA13= | |||
|IFNA@= | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=3085 | |||
|end=21443525 | |||
|end_of_center_position=21443524 | |||
|entrez_id=3439 | |entrez_id=3439 | ||
|gc_percent=0.363184 | |gc_percent=0.363184 | ||
|gene_alias=IFL | |gene_alias=IFL{{!}}IFN{{!}}IFN-ALPHA{{!}}IFN-alphaD{{!}}IFNA13{{!}}IFNA@ | ||
|gene_description=interferon alpha 1 | |gene_description=interferon alpha 1 | ||
|gene_name=IFNA1 | |gene_name=IFNA1 | ||
| Line 12: | Line 21: | ||
|nearest_refseq=NM_024013 | |nearest_refseq=NM_024013 | ||
|nearest_unigene=Hs.37026 | |nearest_unigene=Hs.37026 | ||
|num_trans=0 | |||
|species=human | |||
|start=21443522 | |||
|start_of_center_position=21443523 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100214.1 | |tss_id=hg_100214.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:12, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 3085 |
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| Nearest PromoterID: | NM_024013 |
| Entrez ID: | 3439 |
| Nearest Unigene: | Hs.37026 |
| Nearest Refseq: | NM_024013 |
| Nearest Ensembl: | ENSG00000197919 |
| Gene Name: | IFNA1 |
| Gene Alias: | IFL|IFN|IFN-ALPHA|IFN-alphaD|IFNA13|IFNA@ |
| Gene Description: | interferon alpha 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |