TSS: Hg 100217.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|IFNE1= | |||
|IFNT1= | |||
|INFE1= | |||
|PRO655= | |||
|all_trans=HGNC:18163 | |||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=0 | |||
|distance_to_tss=618 | |distance_to_tss=618 | ||
|end=21481713 | |||
|end_of_center_position=21481695 | |||
|entrez_id=338376 | |entrez_id=338376 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
|gene_alias=IFN-E | |gene_alias=IFN-E{{!}}IFNE1{{!}}IFNT1{{!}}INFE1{{!}}PRO655 | ||
|gene_description=interferon epsilon | |gene_description=interferon epsilon | ||
|gene_name=IFNE | |gene_id=338376 | ||
|gene_name=interferon epsilon | |||
|gene_source=HGNC:18163 | |||
|gene_symbol=IFNE | |||
|gene_synonyms=IFNE1 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:18163 | |||
|nearest_ensembl=ENSG00000184995 | |nearest_ensembl=ENSG00000184995 | ||
|nearest_promoter_id=NM_176891 | |nearest_promoter_id=NM_176891 | ||
|nearest_refseq=NM_176891 | |nearest_refseq=NM_176891 | ||
|nearest_unigene=Hs.682604 | |nearest_unigene=Hs.682604 | ||
|num_trans=338376 | |||
|species=human | |||
|start=21481676 | |||
|start_of_center_position=21481694 | |||
|strand=- | |||
|transcript_name=AY190045 BC100871 BC100872 BC100873 | |||
|tss_classification=no | |||
|tss_id=hg_100217.1 | |tss_id=hg_100217.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Latest revision as of 17:38, 19 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 618 |
|---|---|
| Nearest PromoterID: | NM_176891 |
| Entrez ID: | 338376 |
| Nearest Unigene: | Hs.682604 |
| Nearest Refseq: | NM_176891 |
| Nearest Ensembl: | ENSG00000184995 |
| Gene Name: | interferon epsilon |
| Gene Alias: | IFN-E|IFNE1|IFNT1|INFE1|PRO655 |
| Gene Description: | interferon epsilon |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.