TSS: Hg 100280.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=233726 |entrez_id=101929563 |gc_percent=0.40796 |gene_alias=- |gene_description=uncharacterized LOC101929563 |gene_name=LOC1019...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000664493.1:0 ENST00000640003.1:-19 | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=0 | |||
|distance_to_tss=233726 | |distance_to_tss=233726 | ||
|end=23438681 | |||
|end_of_center_position=23438673 | |||
|entrez_id=101929563 | |entrez_id=101929563 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| Line 8: | Line 13: | ||
|gene_name=LOC101929563 | |gene_name=LOC101929563 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000283982 | ||
|nearest_promoter_id=NR_121602 | |nearest_promoter_id=NR_121602 | ||
|nearest_refseq=NR_121602 | |nearest_refseq=NR_121602 | ||
|nearest_unigene=Hs.533220 | |nearest_unigene=Hs.533220 | ||
|num_trans=2 | |||
|species=human | |||
|start=23438664 | |||
|start_of_center_position=23438672 | |||
|strand=- | |||
|transcript_name=ENST00000664493.1 | |||
|tss_classification=yes | |||
|tss_id=hg_100280.1 | |tss_id=hg_100280.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 17:40, 12 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 233726 |
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| Nearest PromoterID: | NR_121602 |
| Entrez ID: | 101929563 |
| Nearest Unigene: | Hs.533220 |
| Nearest Refseq: | NR_121602 |
| Nearest Ensembl: | ENSG00000283982 |
| Gene Name: | LOC101929563 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101929563 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |