TSS: Hg 100335.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|C9orf11= | |||
|SPACA8= | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance_to_tss=- | |distance=NA | ||
|distance_to_tss=-60737 | |||
|end=27357889 | |||
|end_of_center_position=27357887 | |||
|entrez_id=54586 | |entrez_id=54586 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
|gene_alias=AFAF | |gene_alias=AFAF{{!}}C9orf11{{!}}SPACA8 | ||
|gene_description=equatorin | |gene_description=equatorin | ||
|gene_name=EQTN | |gene_name=EQTN | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_020641 | |nearest_refseq=NM_020641 | ||
|nearest_unigene=Hs.163070 | |nearest_unigene=Hs.163070 | ||
|num_trans=0 | |||
|species=human | |||
|start=27357884 | |||
|start_of_center_position=27357886 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100335.1 | |tss_id=hg_100335.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:15, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -60737 |
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| Nearest PromoterID: | NM_020641 |
| Entrez ID: | 54586 |
| Nearest Unigene: | Hs.163070 |
| Nearest Refseq: | NM_020641 |
| Nearest Ensembl: | ENSG00000120160 |
| Gene Name: | EQTN |
| Gene Alias: | AFAF|C9orf11|SPACA8 |
| Gene Description: | equatorin |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |