TSS: Hg 100336.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|C9orf11= | |||
|SPACA8= | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance_to_tss=- | |distance=NA | ||
|distance_to_tss=-68011 | |||
|end=27365162 | |||
|end_of_center_position=27365161 | |||
|entrez_id=54586 | |entrez_id=54586 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
|gene_alias=AFAF | |gene_alias=AFAF{{!}}C9orf11{{!}}SPACA8 | ||
|gene_description=equatorin | |gene_description=equatorin | ||
|gene_name=EQTN | |gene_name=EQTN | ||
Line 12: | Line 18: | ||
|nearest_refseq=NM_020641 | |nearest_refseq=NM_020641 | ||
|nearest_unigene=Hs.163070 | |nearest_unigene=Hs.163070 | ||
|num_trans=0 | |||
|species=human | |||
|start=27365159 | |||
|start_of_center_position=27365160 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100336.1 | |tss_id=hg_100336.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:15, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | -68011 |
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Nearest PromoterID: | NM_020641 |
Entrez ID: | 54586 |
Nearest Unigene: | Hs.163070 |
Nearest Refseq: | NM_020641 |
Nearest Ensembl: | ENSG00000120160 |
Gene Name: | EQTN |
Gene Alias: | AFAF|C9orf11|SPACA8 |
Gene Description: | equatorin |
Gene Type: | protein-coding |
CpG%: | 0.005 |
GC%: | 0.41791 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |