TSS: Hg 100340.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=-38945 |entrez_id=56832 |gc_percent=0.472637 |gene_alias=IFNT1|INFE1 |gene_description=interferon kappa |gene_name=IFNK |gene_type=...") |
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{{TSSDetail | {{TSSDetail | ||
|INFE1= | |||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=NA | |||
|distance_to_tss=-38945 | |distance_to_tss=-38945 | ||
|end=27485375 | |||
|end_of_center_position=27485370 | |||
|entrez_id=56832 | |entrez_id=56832 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
|gene_alias=IFNT1 | |gene_alias=IFNT1{{!}}INFE1 | ||
|gene_description=interferon kappa | |gene_description=interferon kappa | ||
|gene_name=IFNK | |gene_name=IFNK | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_020124 | |nearest_refseq=NM_020124 | ||
|nearest_unigene=Hs.591083 | |nearest_unigene=Hs.591083 | ||
|num_trans=0 | |||
|species=human | |||
|start=27485363 | |||
|start_of_center_position=27485369 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100340.1 | |tss_id=hg_100340.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:15, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -38945 |
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| Nearest PromoterID: | NM_020124 |
| Entrez ID: | 56832 |
| Nearest Unigene: | Hs.591083 |
| Nearest Refseq: | NM_020124 |
| Nearest Ensembl: | ENSG00000147896 |
| Gene Name: | IFNK |
| Gene Alias: | IFNT1|INFE1 |
| Gene Description: | interferon kappa |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |