TSS: Hg 10035.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=HGNC:16005 | |||
|chr=chr1 | |||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=0 | |||
|distance_to_tss=2 | |distance_to_tss=2 | ||
|end=6419926 | |||
|end_of_center_position=6419918 | |||
|entrez_id=54626 | |entrez_id=54626 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
|gene_alias=bHLHb40 | |gene_alias=bHLHb40 | ||
|gene_description=hes family bHLH transcription factor 2 | |gene_description=hes family bHLH transcription factor 2 | ||
|gene_name=HES2 | |gene_id=54626 | ||
|gene_name=hes family bHLH transcription factor 2 | |||
|gene_source=HGNC:16005 | |||
|gene_symbol=HES2 | |||
|gene_synonyms=bHLHb40 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:16005 | |||
|nearest_ensembl=ENSG00000069812 | |nearest_ensembl=ENSG00000069812 | ||
|nearest_promoter_id=NM_019089 | |nearest_promoter_id=NM_019089 | ||
|nearest_refseq=NM_019089 | |nearest_refseq=NM_019089 | ||
|nearest_unigene=Hs.118727 | |nearest_unigene=Hs.118727 | ||
|tata_box= | |num_trans=54626 | ||
|species=human | |||
|start=6419908 | |||
|start_of_center_position=6419917 | |||
|strand=- | |||
|tata_box=-35(CTCCCTTAAAGC,-,0.00) | |||
|transcript_name=ENST00000377834.8 ENST00000489730.1 AK091122 | |||
|tss_classification=yes | |||
|tss_id=hg_10035.1 | |tss_id=hg_10035.1 | ||
|tss_score=1 | |||
|uniprot_id=K7EJQ0 Q9Y543 | |||
}} | }} | ||
Latest revision as of 17:41, 19 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 2 |
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| Nearest PromoterID: | NM_019089 |
| Entrez ID: | 54626 |
| Nearest Unigene: | Hs.118727 |
| Nearest Refseq: | NM_019089 |
| Nearest Ensembl: | ENSG00000069812 |
| Gene Name: | hes family bHLH transcription factor 2 |
| Gene Alias: | bHLHb40 |
| Gene Description: | hes family bHLH transcription factor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(CTCCCTTAAAGC,-,0.00) |
TSS expression
Expression data not found.