TSS: Hg 100364.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-407668 |entrez_id=203228 |gc_percent=0.328358 |gene_alias=ALSFTD|DENNL72|FTDALS|FTDALS1 |gene_description=chromosome 9 open re...") |
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{{TSSDetail | {{TSSDetail | ||
|DENND9= | |||
|DENNL72= | |||
|FTDALS= | |||
|FTDALS1= | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=NA | |||
|distance_to_tss=-407668 | |distance_to_tss=-407668 | ||
|end=27981535 | |||
|end_of_center_position=27981534 | |||
|entrez_id=203228 | |entrez_id=203228 | ||
|gc_percent=0.328358 | |gc_percent=0.328358 | ||
|gene_alias=ALSFTD | |gene_alias=ALSFTD{{!}}DENND9{{!}}DENNL72{{!}}FTDALS{{!}}FTDALS1 | ||
|gene_description= | |gene_description=C9orf72-SMCR8 complex subunit | ||
|gene_name=C9orf72 | |gene_name=C9orf72 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
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|nearest_refseq=NM_018325 | |nearest_refseq=NM_018325 | ||
|nearest_unigene=Hs.493639 | |nearest_unigene=Hs.493639 | ||
|num_trans=0 | |||
|species=human | |||
|start=27981532 | |||
|start_of_center_position=27981533 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100364.1 | |tss_id=hg_100364.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:15, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | -407668 |
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Nearest PromoterID: | NM_001256054 |
Entrez ID: | 203228 |
Nearest Unigene: | Hs.493639 |
Nearest Refseq: | NM_018325 |
Nearest Ensembl: | ENSG00000147894 |
Gene Name: | C9orf72 |
Gene Alias: | ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1 |
Gene Description: | C9orf72-SMCR8 complex subunit |
Gene Type: | protein-coding |
CpG%: | 0.005 |
GC%: | 0.328358 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |