Template: GenePage: Difference between revisions

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</style>
</style>
</html>
</html>
<span class="section_head">Related TSS IDs</span>
<hr width="270px" size="2" align="left" noshade>
{{#ask: [[Concept:RefTSS]][[gene_id::{{{gene_id|}}}]]
|format=table
|default="No query result."
|headers=hide
|link=all
|searchlabel=... further results
|class=sortable wikitable smwtable
}}
<br>
<span class="section_head">Basic information</span>
<span class="section_head">Basic information</span>
<hr width="270px" size="2" align="left" noshade>
<hr width="270px" size="2" align="left" noshade>
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<table class="inner" >
<table class="inner" >
<tr><th scope="row" align="left">HGNC/MGI_ID:</th><td>{{#ifeq:{{{species}}}|human|<html><a href="http://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=</html>{{{hgnc_mgi_id}}}<html>"></html>|<html><a href="http://www.informatics.jax.org/marker/</html>{{{hgnc_mgi_id}}}<html>"></html>}}{{{hgnc_mgi_id}}}<html></a></html></td></tr>
<tr><th scope="row" align="left">HGNC/MGI_ID:</th><td>{{#ifeq:{{{species}}}|human|<html><a href="http://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=</html>{{{hgnc_mgi_id}}}<html>"></html>|<html><a href="http://www.informatics.jax.org/marker/</html>{{{hgnc_mgi_id}}}<html>"></html>}}{{{hgnc_mgi_id}}}<html></a></html></td></tr>
<tr><th scope="row" align="left">Ensembl:</th><td>{{#if:{{{ensembl}}}|<html><a href="http://www.ensembl.org/id/</html>{{{ensembl}}}<html>"></html>{{{ensembl}}}<html></a></html>|}}</td></tr>
<tr><th scope="row" align="left">Ensembl:</th><td>{{#if:{{{ensembl}}}|<html><a href="http://www.ensembl.org/id/</html>{{#replace:{{{ensembl}}}|Ensembl:|}}<html>"></html>{{{ensembl}}}<html></a></html>|}}</td></tr>
<tr><th scope="row" align="left">Vega:</th><td>{{#if:{{{vega}}}|<html><a href="http://vega.sanger.ac.uk/id/</html>{{#replace:{{{vega}}}|Vega:|}}<html>"></html>{{{vega}}}<html></a></html>|}}</td></tr>
<tr><th scope="row" align="left">Vega:</th><td>{{#if:{{{vega}}}|<html><a href="http://vega.sanger.ac.uk/id/</html>{{#replace:{{{vega}}}|Vega:|}}<html>"></html>{{{vega}}}<html></a></html>|}}</td></tr>
<tr><th scope="row" align="left">HPRD:</th><td>{{{hprd|}}}</td></tr>
<tr><th scope="row" align="left">HPRD:</th><td>{{{hprd|}}}</td></tr>
<tr><th scope="row" align="left">miRBase:</th><td>{{#if:{{{mirbase}}}|<html><a href="http://www.mirbase.org/cgi-bin/mirna_entry.pl?acc=</html>{{#replace:{{{mirbase}}}|miRBase:|}}<html>"></html>{{{mirbase}}}<html></a></html>|}}</td></tr>
<tr><th scope="row" align="left">miRBase:</th><td>{{#if:{{{mirbase}}}|<html><a href="http://www.mirbase.org/cgi-bin/mirna_entry.pl?acc=</html>{{#replace:{{{mirbase}}}|miRBase:|}}<html>"></html>{{{mirbase}}}<html></a></html>|}}</td></tr>
<tr><th scope="row" align="left">IMGT/GENE-DB:</th><td>{{#if:{{{imgt_gene-db}}}|<html><a href="http://www.imgt.org/IMGT_GENE-DB/GENElect?species=Homo+sapiens&query=2+</html>{{#replace:{{{imgt_gene-db}}}|IMGT/GENE-DB:|}}<html>"></html>{{{imgt_gene-db}}}<html></a></html>|}}</td></tr>
<tr><th scope="row" align="left">IMGT/GENE-DB:</th><td>{{#if:{{{imgt_gene-db}}}|<html><a href="http://www.imgt.org/IMGT_GENE-DB/GENElect?species=Homo+sapiens&query=2+</html>{{#replace:{{{imgt_gene-db}}}|IMGT/GENE-DB:|}}<html>"></html>{{{imgt_gene-db}}}<html></a></html>|}}</td></tr>
<tr><th scope="row" align="left">MIM:</th><td>{{#if:{{{mim}}}|<html><a href="https://www.ncbi.nlm.nih.gov/omim/</html>{{#replace:{{{mim}}}|MIM:|}}<html>"></html>{{{mim}}}<html></a></html>|}}</td></tr>
<tr><th scope="row" align="left">MIM:</th><td>{{#if:{{{mim}}}|<html><a href="https://www.ncbi.nlm.nih.gov/omim/</html>{{#replace:{{#replace:{{{mim}}}|MIM:|}}|MGI:MGI:|}}<html>"></html>{{{mim}}}<html></a></html>|}}</td></tr>
</table>
</table>
<br>
<br>
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<tr><th scope="row" align="left">RefSeq transcripts:</th><td>{{#if:{{{refSeq_transcripts}}}|{{#arraydefine:arrayr|{{#replace:{{{refSeq_transcripts}}}| |;}}|;}}{{#arrayprint:arrayr| |@|<html><a href="https://www.ncbi.nlm.nih.gov/nuccore/</html>@<html>"></html>@<html></a></html>}}|}}</td></tr>
<tr><th scope="row" align="left">RefSeq transcripts:</th><td>{{#if:{{{refSeq_transcripts}}}|{{#arraydefine:arrayr|{{#replace:{{{refSeq_transcripts}}}| |;}}|;}}{{#arrayprint:arrayr| |@|<html><a href="https://www.ncbi.nlm.nih.gov/nuccore/</html>@<html>"></html>@<html></a></html>}}|}}</td></tr>
<tr><th scope="row" align="left">UCSC genes:</th><td>{{#if:{{{ucsc_genes}}}|{{#arraydefine:arrayu|{{#replace:{{{ucsc_genes}}}| |;}}|;}}{{#arrayprint:arrayu||@|<html><a href="http://genome.ucsc.edu/cgi-bin/hgTracks?position=</html>@<html>"></html>@<html></a><br></html>}}|}}</td></tr>
<tr><th scope="row" align="left">UCSC genes:</th><td>{{#if:{{{ucsc_genes}}}|{{#arraydefine:arrayu|{{#replace:{{{ucsc_genes}}}| |;}}|;}}{{#arrayprint:arrayu||@|<html><a href="http://genome.ucsc.edu/cgi-bin/hgTracks?position=</html>@<html>"></html>@<html></a><br></html>}}|}}</td></tr>
<tr><th scope="row" align="left">Other_mRNAs:</th><td>{{#if:{{{other_mrnas}}}|{{#replace:{{{other_mrnas}}}| |<br>}}|}}</td></tr>
<tr><th scope="row" align="left">Other_mRNAs:</th><td>{{#if:{{{other_mrnas}}}|{{#arraydefine:arrayo|{{#replace:{{{other_mrnas}}}| |;}}|;}}{{#arrayprint:arrayo||@|<html><a href="https://www.ncbi.nlm.nih.gov/nuccore/</html>@<html>"></html>@<html></a><br></html>}}|}}</td></tr>
</table>
</table>
<br>
<span class="section_head">Relatad TSS IDs</span>
<hr width="270px" size="2" align="left" noshade>
{{#if:{{{gene_id|}}}|
{{#ask: [[TSS:+]][[gene_id::{{{gene_id|}}}]]
|format=table
|headers=hide
|link=all
|searchlabel=... further results
|class=sortable wikitable smwtable
}}
|}}


{{#set:gene_symbol={{{gene_symbol|}}}}}
{{#set:gene_symbol={{{gene_symbol}}}}}
{{#set:ensembl={{{ensembl|}}}}}
{{#set:ensembl={{{ensembl}}}}}
{{#set:gencode_transcripts={{{gencode_transcripts|}}}}}
{{#set:gencode_transcripts={{{gencode_transcripts}}}}}
{{#set:gene_id={{{gene_id|}}}}}
{{#set:gene_id={{{gene_id}}}}}
{{#set:gene_name={{{gene_name|}}}}}
{{#set:gene_name={{{gene_name}}}}}
{{#set:gene_synonyms={{{gene_synonyms|}}}}}
{{#set:gene_synonyms={{{gene_synonyms}}}}}
{{#set:gene_type={{{gene_type|}}}}}
{{#set:gene_type={{{gene_type}}}}}
{{#set:hgnc_mgi_id={{{hgnc_mgi_id|}}}}}
{{#set:hgnc_mgi_id={{{hgnc_mgi_id}}}}}
{{#set:hprd={{{hprd|}}}}}
{{#set:hprd={{{hprd}}}}}
{{#set:imgt_gene-db={{{imgt_gene-db|}}}}}
{{#set:imgt_gene-db={{{imgt_gene-db}}}}}
{{#set:mim={{{mim|}}}}}
{{#set:mim={{{mim}}}}}
{{#set:mirbase={{{mirbase|}}}}}
{{#set:mirbase={{{mirbase}}}}}
{{#set:name={{{name|}}}}}
{{#set:old_gene_ids={{{old_gene_ids}}}}}
{{#set:old_gene_ids={{{old_gene_ids|}}}}}
{{#set:other_mrnas={{{other_mrnas}}}}}
{{#set:other_mrnas={{{other_mrnas|}}}}}
{{#set:refSeq_transcripts={{{refSeq_transcripts}}}}}
{{#set:refSeq_transcripts={{{refSeq_transcripts|}}}}}
{{#set:species={{{species}}}}}
{{#set:species={{{species|}}}}}
{{#set:ucsc_genes={{{ucsc_genes}}}}}
{{#set:ucsc_genes={{{ucsc_genes|}}}}}
{{#set:vega={{{vega}}}}}
{{#set:vega={{{vega|}}}}}


[[Category:EntrezGene_IDs]]
[[Category:EntrezGene_IDs]]

Latest revision as of 17:10, 13 June 2024



Related TSS IDs


"No query result."Some use of "" in your query was not closed by a matching "".
Basic information


GeneID:{{{gene_id}}}
Species:{{{species}}}
Gene name:{{{gene_name}}}
Gene symbol:{{{gene_symbol}}}
Gene synonyms:{{{gene_synonyms}}}
Gene type:{{{gene_type}}}
Old GeneIDs:{{{old_gene_ids}}}


Links to external databases


HGNC/MGI_ID:{{{hgnc_mgi_id}}}
Ensembl:{{{ensembl}}}
Vega:{{{vega}}}
HPRD:
miRBase:{{{mirbase}}}
IMGT/GENE-DB:{{{imgt_gene-db}}}
MIM:{{{mim}}}


Transcripts


Gencode transcripts:{{{gencode_transcripts}}}
RefSeq transcripts:Template:(({refSeq_transcriptsTemplate:))}">Template:(({refSeq_transcriptsTemplate:))}
UCSC genes:Template:(({ucsc_genesTemplate:))}">Template:(({ucsc_genesTemplate:))}
Other_mRNAs:Template:(({other_mrnasTemplate:))}">Template:(({other_mrnasTemplate:))}


Property "Ensembl" (as page type) with input value "{{{ensembl}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Gencode transcripts" (as page type) with input value "{{{gencode_transcripts}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.



Property "Hprd" (as page type) with input value "{{{hprd}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Imgt gene-db" (as page type) with input value "{{{imgt_gene-db}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Mim" (as page type) with input value "{{{mim}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Mirbase" (as page type) with input value "{{{mirbase}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Old gene ids" (as page type) with input value "{{{old_gene_ids}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Other mrnas" (as page type) with input value "{{{other_mrnas}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "RefSeq transcripts" (as page type) with input value "{{{refSeq_transcripts}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Property "Ucsc genes" (as page type) with input value "{{{ucsc_genes}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Vega" (as page type) with input value "{{{vega}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.