Template: GenePage: Difference between revisions
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</style> | </style> | ||
</html> | </html> | ||
<span class="section_head">Related TSS IDs</span> | |||
<hr width="270px" size="2" align="left" noshade> | |||
{{#ask: [[Concept:RefTSS]][[gene_id::{{{gene_id|}}}]] | |||
|format=table | |||
|default="No query result." | |||
|headers=hide | |||
|link=all | |||
|searchlabel=... further results | |||
|class=sortable wikitable smwtable | |||
}} | |||
<br> | |||
<span class="section_head">Basic information</span> | <span class="section_head">Basic information</span> | ||
<hr width="270px" size="2" align="left" noshade> | <hr width="270px" size="2" align="left" noshade> | ||
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<table class="inner" > | <table class="inner" > | ||
<tr><th scope="row" align="left">HGNC/MGI_ID:</th><td>{{#ifeq:{{{species}}}|human|<html><a href="http://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=</html>{{{hgnc_mgi_id}}}<html>"></html>|<html><a href="http://www.informatics.jax.org/marker/</html>{{{hgnc_mgi_id}}}<html>"></html>}}{{{hgnc_mgi_id}}}<html></a></html></td></tr> | <tr><th scope="row" align="left">HGNC/MGI_ID:</th><td>{{#ifeq:{{{species}}}|human|<html><a href="http://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=</html>{{{hgnc_mgi_id}}}<html>"></html>|<html><a href="http://www.informatics.jax.org/marker/</html>{{{hgnc_mgi_id}}}<html>"></html>}}{{{hgnc_mgi_id}}}<html></a></html></td></tr> | ||
<tr><th scope="row" align="left">Ensembl:</th><td>{{#if:{{{ensembl}}}|<html><a href="http://www.ensembl.org/id/</html>{{{ensembl}}}<html>"></html>{{{ensembl}}}<html></a></html>|}}</td></tr> | <tr><th scope="row" align="left">Ensembl:</th><td>{{#if:{{{ensembl}}}|<html><a href="http://www.ensembl.org/id/</html>{{#replace:{{{ensembl}}}|Ensembl:|}}<html>"></html>{{{ensembl}}}<html></a></html>|}}</td></tr> | ||
<tr><th scope="row" align="left">Vega:</th><td>{{#if:{{{vega}}}|<html><a href="http://vega.sanger.ac.uk/id/</html>{{#replace:{{{vega}}}|Vega:|}}<html>"></html>{{{vega}}}<html></a></html>|}}</td></tr> | <tr><th scope="row" align="left">Vega:</th><td>{{#if:{{{vega}}}|<html><a href="http://vega.sanger.ac.uk/id/</html>{{#replace:{{{vega}}}|Vega:|}}<html>"></html>{{{vega}}}<html></a></html>|}}</td></tr> | ||
<tr><th scope="row" align="left">HPRD:</th><td>{{{hprd|}}}</td></tr> | <tr><th scope="row" align="left">HPRD:</th><td>{{{hprd|}}}</td></tr> | ||
<tr><th scope="row" align="left">miRBase:</th><td>{{#if:{{{mirbase}}}|<html><a href="http://www.mirbase.org/cgi-bin/mirna_entry.pl?acc=</html>{{#replace:{{{mirbase}}}|miRBase:|}}<html>"></html>{{{mirbase}}}<html></a></html>|}}</td></tr> | <tr><th scope="row" align="left">miRBase:</th><td>{{#if:{{{mirbase}}}|<html><a href="http://www.mirbase.org/cgi-bin/mirna_entry.pl?acc=</html>{{#replace:{{{mirbase}}}|miRBase:|}}<html>"></html>{{{mirbase}}}<html></a></html>|}}</td></tr> | ||
<tr><th scope="row" align="left">IMGT/GENE-DB:</th><td>{{#if:{{{imgt_gene-db}}}|<html><a href="http://www.imgt.org/IMGT_GENE-DB/GENElect?species=Homo+sapiens&query=2+</html>{{#replace:{{{imgt_gene-db}}}|IMGT/GENE-DB:|}}<html>"></html>{{{imgt_gene-db}}}<html></a></html>|}}</td></tr> | <tr><th scope="row" align="left">IMGT/GENE-DB:</th><td>{{#if:{{{imgt_gene-db}}}|<html><a href="http://www.imgt.org/IMGT_GENE-DB/GENElect?species=Homo+sapiens&query=2+</html>{{#replace:{{{imgt_gene-db}}}|IMGT/GENE-DB:|}}<html>"></html>{{{imgt_gene-db}}}<html></a></html>|}}</td></tr> | ||
<tr><th scope="row" align="left">MIM:</th><td>{{#if:{{{mim}}}|<html><a href="https://www.ncbi.nlm.nih.gov/omim/</html>{{#replace:{{{mim}}}|MIM:|}}<html>"></html>{{{mim}}}<html></a></html>|}}</td></tr> | <tr><th scope="row" align="left">MIM:</th><td>{{#if:{{{mim}}}|<html><a href="https://www.ncbi.nlm.nih.gov/omim/</html>{{#replace:{{#replace:{{{mim}}}|MIM:|}}|MGI:MGI:|}}<html>"></html>{{{mim}}}<html></a></html>|}}</td></tr> | ||
</table> | </table> | ||
<br> | <br> | ||
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<tr><th scope="row" align="left">Other_mRNAs:</th><td>{{#if:{{{other_mrnas}}}|{{#arraydefine:arrayo|{{#replace:{{{other_mrnas}}}| |;}}|;}}{{#arrayprint:arrayo||@|<html><a href="https://www.ncbi.nlm.nih.gov/nuccore/</html>@<html>"></html>@<html></a><br></html>}}|}}</td></tr> | <tr><th scope="row" align="left">Other_mRNAs:</th><td>{{#if:{{{other_mrnas}}}|{{#arraydefine:arrayo|{{#replace:{{{other_mrnas}}}| |;}}|;}}{{#arrayprint:arrayo||@|<html><a href="https://www.ncbi.nlm.nih.gov/nuccore/</html>@<html>"></html>@<html></a><br></html>}}|}}</td></tr> | ||
</table> | </table> | ||
{{#set:gene_symbol={{{gene_symbol | {{#set:gene_symbol={{{gene_symbol}}}}} | ||
{{#set:ensembl={{{ensembl | {{#set:ensembl={{{ensembl}}}}} | ||
{{#set:gencode_transcripts={{{gencode_transcripts | {{#set:gencode_transcripts={{{gencode_transcripts}}}}} | ||
{{#set:gene_id={{{gene_id | {{#set:gene_id={{{gene_id}}}}} | ||
{{#set:gene_name={{{gene_name | {{#set:gene_name={{{gene_name}}}}} | ||
{{#set:gene_synonyms={{{gene_synonyms | {{#set:gene_synonyms={{{gene_synonyms}}}}} | ||
{{#set:gene_type={{{gene_type | {{#set:gene_type={{{gene_type}}}}} | ||
{{#set:hgnc_mgi_id={{{hgnc_mgi_id | {{#set:hgnc_mgi_id={{{hgnc_mgi_id}}}}} | ||
{{#set:hprd={{{hprd | {{#set:hprd={{{hprd}}}}} | ||
{{#set:imgt_gene-db={{{imgt_gene-db | {{#set:imgt_gene-db={{{imgt_gene-db}}}}} | ||
{{#set:mim={{{mim | {{#set:mim={{{mim}}}}} | ||
{{#set:mirbase={{{mirbase | {{#set:mirbase={{{mirbase}}}}} | ||
{{#set:old_gene_ids={{{old_gene_ids}}}}} | |||
{{#set:old_gene_ids={{{old_gene_ids | {{#set:other_mrnas={{{other_mrnas}}}}} | ||
{{#set:other_mrnas={{{other_mrnas | {{#set:refSeq_transcripts={{{refSeq_transcripts}}}}} | ||
{{#set:refSeq_transcripts={{{refSeq_transcripts | {{#set:species={{{species}}}}} | ||
{{#set:species={{{species | {{#set:ucsc_genes={{{ucsc_genes}}}}} | ||
{{#set:ucsc_genes={{{ucsc_genes | {{#set:vega={{{vega}}}}} | ||
{{#set:vega={{{vega | |||
[[Category:EntrezGene_IDs]] | [[Category:EntrezGene_IDs]] |
Latest revision as of 17:10, 13 June 2024
Related TSS IDs
"No query result."Some use of "" in your query was not closed by a matching "".
Basic information
GeneID: | {{{gene_id}}} |
---|---|
Species: | {{{species}}} |
Gene name: | {{{gene_name}}} |
Gene symbol: | {{{gene_symbol}}} |
Gene synonyms: | {{{gene_synonyms}}} |
Gene type: | {{{gene_type}}} |
Old GeneIDs: | {{{old_gene_ids}}} |
Links to external databases
HGNC/MGI_ID: | {{{hgnc_mgi_id}}} |
---|---|
Ensembl: | {{{ensembl}}} |
Vega: | {{{vega}}} |
HPRD: | |
miRBase: | {{{mirbase}}} |
IMGT/GENE-DB: | {{{imgt_gene-db}}} |
MIM: | {{{mim}}} |
Transcripts
Gencode transcripts: | {{{gencode_transcripts}}} |
---|---|
RefSeq transcripts: | Template:(({refSeq_transcriptsTemplate:))}">Template:(({refSeq_transcriptsTemplate:))} |
UCSC genes: | Template:(({ucsc_genesTemplate:))}">Template:(({ucsc_genesTemplate:))} |
Other_mRNAs: | Template:(({other_mrnasTemplate:))}">Template:(({other_mrnasTemplate:))} |
Property "Ensembl" (as page type) with input value "{{{ensembl}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "Gencode transcripts" (as page type) with input value "{{{gencode_transcripts}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "Hprd" (as page type) with input value "{{{hprd}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Imgt gene-db" (as page type) with input value "{{{imgt_gene-db}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Mim" (as page type) with input value "{{{mim}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Mirbase" (as page type) with input value "{{{mirbase}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Old gene ids" (as page type) with input value "{{{old_gene_ids}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Other mrnas" (as page type) with input value "{{{other_mrnas}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "RefSeq transcripts" (as page type) with input value "{{{refSeq_transcripts}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "Ucsc genes" (as page type) with input value "{{{ucsc_genes}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Vega" (as page type) with input value "{{{vega}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.