TSS: Hg 10040.1: Difference between revisions
From referenceTSS
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|DDR3= | |DDR3= | ||
|DR3= | |DR3= | ||
|GEF720= | |||
|LARD= | |LARD= | ||
|PLEKHG5= | |||
|TNFRSF12= | |TNFRSF12= | ||
|TR3= | |TR3= | ||
| Line 10: | Line 12: | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance= | |distance=NA | ||
|distance_to_tss=-8431 | |distance_to_tss=-8431 | ||
|end=6474644 | |end=6474644 | ||
| Line 16: | Line 18: | ||
|entrez_id=8718 | |entrez_id=8718 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
|gene_alias=APO-3 | |gene_alias=APO-3{{!}}DDR3{{!}}DR3{{!}}GEF720{{!}}LARD{{!}}PLEKHG5{{!}}TNFRSF12{{!}}TR3{{!}}TRAMP{{!}}WSL-1{{!}}WSL-LR | ||
|gene_description=TNF receptor superfamily member 25 | |gene_description=TNF receptor superfamily member 25 | ||
|gene_name=TNFRSF25 | |gene_name=TNFRSF25 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000215788 | |nearest_ensembl=ENSG00000215788 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_148966 | ||
|nearest_refseq=NM_003790 | |nearest_refseq=NM_003790 | ||
|nearest_unigene=Hs.462529 | |nearest_unigene=Hs.462529 | ||
Latest revision as of 16:16, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -8431 |
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| Nearest PromoterID: | NM_148966 |
| Entrez ID: | 8718 |
| Nearest Unigene: | Hs.462529 |
| Nearest Refseq: | NM_003790 |
| Nearest Ensembl: | ENSG00000215788 |
| Gene Name: | TNFRSF25 |
| Gene Alias: | APO-3|DDR3|DR3|GEF720|LARD|PLEKHG5|TNFRSF12|TR3|TRAMP|WSL-1|WSL-LR |
| Gene Description: | TNF receptor superfamily member 25 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |