TSS: Hg 100396.1: Difference between revisions
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(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=97 |entrez_id=4712 |gc_percent=0.616915 |gene_alias=B17|CI |gene_description=NADH:ubiquinone oxidoreductase subunit B6 |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
|CI= | |||
|all_trans=KJ891678:14 CR456920:15 AF035840:-28 BC029247:-29 AK289702:-38 AF067167:-55 BC016708:-56 ENST00000379847.8:-59 ENST00000350021.2:-59 NM_002493:-59 NM_182739:-59 BC009801:-59 ENST00000366466.5:-84 NM_001199987:-84 | |||
|chr=chr9 | |||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance_to_tss= | |distance=14 | ||
|distance_to_tss=72 | |||
|end=32573100 | |||
|end_of_center_position=32573088 | |||
|entrez_id=4712 | |entrez_id=4712 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
|gene_alias=B17 | |gene_alias=B17{{!}}CI | ||
|gene_description=NADH:ubiquinone oxidoreductase subunit B6 | |gene_description=NADH:ubiquinone oxidoreductase subunit B6 | ||
|gene_name=NDUFB6 | |gene_name=NDUFB6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000165264 | |nearest_ensembl=ENSG00000165264 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_182739 | ||
|nearest_refseq=NM_002493 | |nearest_refseq=NM_002493 | ||
|nearest_unigene=Hs.493668 | |nearest_unigene=Hs.493668 | ||
|num_trans=14 | |||
|species=human | |||
|start=32573074 | |||
|start_of_center_position=32573087 | |||
|strand=- | |||
|transcript_name=KJ891678 | |||
|tss_classification=yes | |||
|tss_id=hg_100396.1 | |tss_id=hg_100396.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:16, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 72 |
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Nearest PromoterID: | NM_182739 |
Entrez ID: | 4712 |
Nearest Unigene: | Hs.493668 |
Nearest Refseq: | NM_002493 |
Nearest Ensembl: | ENSG00000165264 |
Gene Name: | NDUFB6 |
Gene Alias: | B17|CI |
Gene Description: | NADH:ubiquinone oxidoreductase subunit B6 |
Gene Type: | protein-coding |
CpG%: | 0.125 |
GC%: | 0.616915 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |