TSS: Mm 25089.1: Difference between revisions
From referenceTSS
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|B7x= | |B7x= | ||
|BC032925= | |BC032925= | ||
|all_trans= | |all_trans=MGI:3039619 | ||
|chr=chr3 | |chr=chr3 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 12: | Line 12: | ||
|entrez_id=242122 | |entrez_id=242122 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
|gene_alias=B7h4 | |gene_alias=B7h4{{!}}B7s1{{!}}B7x{{!}}BC032925 | ||
|gene_description=V-set domain containing T cell activation inhibitor 1 | |gene_description=V-set domain containing T cell activation inhibitor 1 | ||
|gene_id=242122 | |gene_id=242122 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_178594 | |nearest_refseq=NM_178594 | ||
|nearest_unigene=Mm.137467 | |nearest_unigene=Mm.137467 | ||
|num_trans= | |num_trans=242122 | ||
|species=mouse | |species=mouse | ||
|start=100825452 | |start=100825452 | ||
|start_of_center_position=100825459 | |start_of_center_position=100825459 | ||
|strand=+ | |strand=+ | ||
|tata_box= | |tata_box=-33(CACTATTTAAAG,-,0.00),-31(CTATTTAAAGAC,+,0.00) | ||
|transcript_name=ENSMUST00000054791.8 | |transcript_name=ENSMUST00000054791.8 AK143276 AK145664 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_25089.1 | |tss_id=mm_25089.1 | ||
Latest revision as of 16:09, 27 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1 |
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| Nearest PromoterID: | NM_178594 |
| Entrez ID: | 242122 |
| Nearest Unigene: | Mm.137467 |
| Nearest Refseq: | NM_178594 |
| Nearest Ensembl: | ENSMUSG00000051076 |
| Gene Name: | V-set domain containing T cell activation inhibitor 1 |
| Gene Alias: | B7h4|B7s1|B7x|BC032925 |
| Gene Description: | V-set domain containing T cell activation inhibitor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(CACTATTTAAAG,-,0.00),-31(CTATTTAAAGAC,+,0.00) |
TSS expression
Expression data not found.