TSS: Hg 100405.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=31716 |entrez_id=54840 |gc_percent=0.457711 |gene_alias=AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT |gene_description=aprataxin |gene_name=...") |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|AOA1= | |||
|AXA1= | |||
|EAOH= | |||
|EOAHA= | |||
|FHA-HIT= | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=NA | |||
|distance_to_tss=31716 | |distance_to_tss=31716 | ||
|end=32969863 | |||
|end_of_center_position=32969861 | |||
|entrez_id=54840 | |entrez_id=54840 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
|gene_alias=AOA | |gene_alias=AOA{{!}}AOA1{{!}}AXA1{{!}}EAOH{{!}}EOAHA{{!}}FHA-HIT | ||
|gene_description=aprataxin | |gene_description=aprataxin | ||
|gene_name=APTX | |gene_name=APTX | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000137074 | |nearest_ensembl=ENSG00000137074 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001195249 | ||
|nearest_refseq=NM_017692 | |nearest_refseq=NM_017692 | ||
|nearest_unigene=Hs.20158 | |nearest_unigene=Hs.20158 | ||
|num_trans=0 | |||
|species=human | |||
|start=32969857 | |||
|start_of_center_position=32969860 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100405.1 | |tss_id=hg_100405.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:16, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | 31716 |
---|---|
Nearest PromoterID: | NM_001195249 |
Entrez ID: | 54840 |
Nearest Unigene: | Hs.20158 |
Nearest Refseq: | NM_017692 |
Nearest Ensembl: | ENSG00000137074 |
Gene Name: | APTX |
Gene Alias: | AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT |
Gene Description: | aprataxin |
Gene Type: | protein-coding |
CpG%: | 0.01 |
GC%: | 0.457711 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |