TSS: Hg 233750.1: Difference between revisions
From referenceTSS
mNo edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{ | {{TSSDetail | ||
|all_trans= | |all_trans=LF206690:201 MA442267:201 | ||
|chr=chr1 | |||
|chr= | |cpg_percent=0.025 | ||
|cpg_percent= | |distance=201 | ||
|distance= | |distance_to_tss=1419 | ||
|distance_to_tss= | |end=19485522 | ||
|end= | |end_of_center_position=19485513 | ||
|entrez_id= | |entrez_id=102466751 | ||
|gc_percent= | |gc_percent=0.666667 | ||
|gene_alias= | |gene_alias=hsa-mir-6859-1 | ||
|gene_description= | |gene_description=microRNA 6859-1 | ||
|gene_id= | |gene_id= | ||
|gene_name= | |gene_name=MIR6859-1 | ||
|gene_source= | |gene_source= | ||
|gene_symbol= | |gene_symbol= | ||
|gene_synonyms= | |gene_synonyms= | ||
|gene_type= | |gene_type=ncRNA | ||
|hgnc_mgi_id= | |hgnc_mgi_id= | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000278267 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_106918 | ||
|nearest_refseq= | |nearest_refseq=NR_106918 | ||
|nearest_unigene= | |nearest_unigene= | ||
|num_trans= | |num_trans=2 | ||
|peakPage= | |||
|peak_id=hg_233750.1 | |peak_id=hg_233750.1 | ||
|peak_score= | |peak_score= | ||
|start= | |species=human | ||
|strand= | |start=19485503 | ||
|start_of_center_position=19485512 | |||
|strand=+ | |||
|tata_box= | |tata_box= | ||
|transcript_name= | |transcript_name=LF206690 MA442267 | ||
|tss_classification=yes | |||
|tss_id=hg_233750.1 | |||
|tss_score=1 | |||
|uniprot_id= | |uniprot_id= | ||
}} | }} |
Latest revision as of 09:07, 14 July 2021
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | 1419 |
---|---|
Nearest PromoterID: | NR_106918 |
Entrez ID: | 102466751 |
Nearest Unigene: | |
Nearest Refseq: | NR_106918 |
Nearest Ensembl: | ENSG00000278267 |
Gene Name: | MIR6859-1 |
Gene Alias: | hsa-mir-6859-1 |
Gene Description: | microRNA 6859-1 |
Gene Type: | ncRNA |
CpG%: | 0.025 |
GC%: | 0.666667 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |