TSS: Hg 100423.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-35546 |entrez_id=55234 |gc_percent=0.626866 |gene_alias=BWD|SMU-1|fSAP57 |gene_description=DNA replication regulator and splic...") |
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{{TSSDetail | {{TSSDetail | ||
|SMU-1= | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance_to_tss= | |distance=NA | ||
|entrez_id= | |distance_to_tss=3570 | ||
|end=33112271 | |||
|end_of_center_position=33112263 | |||
|entrez_id=113219452 | |||
|fSAP57= | |||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
|gene_alias= | |gene_alias=- | ||
|gene_description= | |gene_description=microRNA 12117 | ||
|gene_name= | |gene_name=MIR12117 | ||
|gene_type= | |gene_type=ncRNA | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_162131 | ||
|nearest_refseq= | |nearest_refseq=NR_162131 | ||
|nearest_unigene= | |nearest_unigene= | ||
|num_trans=0 | |||
|species=human | |||
|start=33112253 | |||
|start_of_center_position=33112262 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100423.1 | |tss_id=hg_100423.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 15:19, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 3570 |
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Nearest PromoterID: | NR_162131 |
Entrez ID: | 113219452 |
Nearest Unigene: | |
Nearest Refseq: | NR_162131 |
Nearest Ensembl: | |
Gene Name: | MIR12117 |
Gene Alias: | - |
Gene Description: | microRNA 12117 |
Gene Type: | ncRNA |
CpG%: | 0.005 |
GC%: | 0.626866 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |