TSS: Hg 100100.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans=LF355499:-37 MA591076:-37 LF355500:-148 MA591077:-148 | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance= | |distance=-37 | ||
|distance_to_tss=- | |distance_to_tss=-220496 | ||
|end=16506322 | |end=16506322 | ||
|end_of_center_position=16506318 | |end_of_center_position=16506318 | ||
|entrez_id= | |entrez_id=111216284 | ||
|gc_percent=0.39801 | |gc_percent=0.39801 | ||
|gene_alias= | |gene_alias=- | ||
|gene_description= | |gene_description=BNC2 antisense RNA 1 | ||
|gene_name= | |gene_name=BNC2-AS1 | ||
|gene_type= | |gene_type=ncRNA | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000234779 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_151723 | ||
|nearest_refseq= | |nearest_refseq=NR_151723 | ||
|nearest_unigene=Hs. | |nearest_unigene=Hs.609218 | ||
|num_trans= | |num_trans=4 | ||
|species=human | |species=human | ||
|start=16506313 | |start=16506313 | ||
|start_of_center_position=16506317 | |start_of_center_position=16506317 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=LF355499 MA591076 | ||
|tss_classification= | |tss_classification=yes | ||
|tss_id=hg_100100.1 | |tss_id=hg_100100.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:37, 12 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -220496 |
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| Nearest PromoterID: | NR_151723 |
| Entrez ID: | 111216284 |
| Nearest Unigene: | Hs.609218 |
| Nearest Refseq: | NR_151723 |
| Nearest Ensembl: | ENSG00000234779 |
| Gene Name: | BNC2-AS1 |
| Gene Alias: | - |
| Gene Description: | BNC2 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.39801 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |