TSS: Hg 100142.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|FAM154A= | |FAM154A= | ||
|all_trans=KJ900327:-188 BC033489:-466 ENST00000380534. | |all_trans=KJ900327:-188 BC033489:-466 ENST00000380534.9:-489 ENST00000583128.2:-489 NM_001287050:-489 NM_153707:-489 AK292245:-489 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
|distance=-188 | |distance=-188 | ||
|distance_to_tss= | |distance_to_tss=491 | ||
|end=19032720 | |end=19032720 | ||
|end_of_center_position=19032719 | |end_of_center_position=19032719 | ||
|entrez_id=158297 | |entrez_id=158297 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
|gene_alias=C9orf138 | |gene_alias=C9orf138{{!}}FAM154A | ||
|gene_description=stabilizer of axonemal microtubules 1 | |gene_description=stabilizer of axonemal microtubules 1 | ||
|gene_name=SAXO1 | |gene_name=SAXO1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000155875 | |nearest_ensembl=ENSG00000155875 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001287050 | ||
|nearest_refseq=NM_153707 | |nearest_refseq=NM_153707 | ||
|nearest_unigene=Hs.731593 | |nearest_unigene=Hs.731593 | ||
Latest revision as of 16:11, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 491 |
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| Nearest PromoterID: | NM_001287050 |
| Entrez ID: | 158297 |
| Nearest Unigene: | Hs.731593 |
| Nearest Refseq: | NM_153707 |
| Nearest Ensembl: | ENSG00000155875 |
| Gene Name: | SAXO1 |
| Gene Alias: | C9orf138|FAM154A |
| Gene Description: | stabilizer of axonemal microtubules 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |