TSS: Hg 100169.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance= | |distance=NA | ||
|distance_to_tss= | |distance_to_tss=103161 | ||
|end=19512176 | |end=19512176 | ||
|end_of_center_position=19512171 | |end_of_center_position=19512171 | ||
|entrez_id=340485 | |entrez_id=340485 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
|gene_alias=ALKCDase2 | |gene_alias=ALKCDase2{{!}}ASAH3L | ||
|gene_description=alkaline ceramidase 2 | |gene_description=alkaline ceramidase 2 | ||
|gene_name=ACER2 | |gene_name=ACER2 | ||
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|start_of_center_position=19512170 | |start_of_center_position=19512170 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=31(AGCTTTTAAAGG,-,0.00),32(GCTTTTAAAGGC,+,0.00),32(GCTTTTAAAGGC,-,0.00),33(CTTTTAAAGGCC,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:11, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 103161 |
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| Nearest PromoterID: | NM_001010887 |
| Entrez ID: | 340485 |
| Nearest Unigene: | Hs.41379 |
| Nearest Refseq: | NM_001010887 |
| Nearest Ensembl: | ENSG00000177076 |
| Gene Name: | ACER2 |
| Gene Alias: | ALKCDase2|ASAH3L |
| Gene Description: | alkaline ceramidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 31(AGCTTTTAAAGG,-,0.00),32(GCTTTTAAAGGC,+,0.00),32(GCTTTTAAAGGC,-,0.00),33(CTTTTAAAGGCC,+,0.00) |