TSS: Hg 100209.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|LEIF2H=
|LEIF2H=
|all_trans=ENST00000380222.3:12 uc010mis.4:12 V00542:12 NM_002172:24 BC074956:24 BC104159:26 BC104160:26 KJ891434:68
|all_trans=HGNC:5420
|chr=chr9
|chr=chr9
|cpg_percent=0.01
|cpg_percent=0.01
|distance=12
|distance=0
|distance_to_tss=-26
|distance_to_tss=0
|end=21240007
|end=21240007
|end_of_center_position=21240005
|end_of_center_position=21240005
|entrez_id=3448
|entrez_id=3448
|gc_percent=0.437811
|gc_percent=0.437811
|gene_alias=IFN-alphaH
|gene_alias=IFN-alphaH{{!}}LEIF2H
|gene_description=interferon alpha 14
|gene_description=interferon alpha 14
|gene_id=3448
|gene_id=3448
Line 23: Line 23:
|nearest_refseq=NM_002172
|nearest_refseq=NM_002172
|nearest_unigene=Hs.93907
|nearest_unigene=Hs.93907
|num_trans=8
|num_trans=3448
|species=human
|species=human
|start=21240002
|start=21240002
|start_of_center_position=21240004
|start_of_center_position=21240004
|strand=-
|strand=-
|transcript_name=ENST00000380222.3 uc010mis.4 V00542
|transcript_name=ENST00000380222.4
|tss_classification=no
|tss_classification=no
|tss_id=hg_100209.1
|tss_id=hg_100209.1

Latest revision as of 17:38, 19 July 2021

Basic information about the TSS


TSS ID:hg_100209.1
Species:human
Chr:chr9
Start:21240002
End:21240007
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation


Transcript_name:ENST00000380222.4
Distance:0
GeneID:3448
HGNC/MGI_ID:HGNC:5420
UniProt_ID:P01570
Gene_name:interferon alpha 14
Gene_symbol:IFNA14
Gene_synonyms:IFN-alphaH LEIF2H
Gene_source:HGNC:5420



TATA-Box annotation


Distance to TSS:0
Nearest PromoterID:NM_002172
Entrez ID:3448
Nearest Unigene:Hs.93907
Nearest Refseq:NM_002172
Nearest Ensembl:ENSG00000228083
Gene Name:interferon alpha 14
Gene Alias:IFN-alphaH|LEIF2H
Gene Description:interferon alpha 14
Gene Type:protein-coding
CpG%:0.01
GC%:0.437811
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.