TSS: Hg 100278.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance= | |distance=NA | ||
|distance_to_tss=253953 | |distance_to_tss=253953 | ||
|end=23418449 | |end=23418449 | ||
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|gene_name=LOC101929563 | |gene_name=LOC101929563 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000283982 | ||
|nearest_promoter_id=NR_121602 | |nearest_promoter_id=NR_121602 | ||
|nearest_refseq=NR_121602 | |nearest_refseq=NR_121602 | ||
| Line 21: | Line 21: | ||
|start_of_center_position=23418446 | |start_of_center_position=23418446 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=87(GTCTTTTTATGG,-,0.00),89(CTTTTTATGGTA,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 14:21, 14 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 253953 |
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| Nearest PromoterID: | NR_121602 |
| Entrez ID: | 101929563 |
| Nearest Unigene: | Hs.533220 |
| Nearest Refseq: | NR_121602 |
| Nearest Ensembl: | ENSG00000283982 |
| Gene Name: | LOC101929563 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101929563 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.268657 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 87(GTCTTTTTATGG,-,0.00),89(CTTTTTATGGTA,+,0.00) |