TSS: Hg 100511.1: Difference between revisions

Latest revision as of 15:21, 15 June 2021

Basic information about the TSS

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 16)

Gene and protein annotation

TATA-Box annotation

Distance to TSS:	207
Nearest PromoterID:	NM_001184943
Entrez ID:	203259
Nearest Unigene:	Hs.493771
Nearest Refseq:	NM_147202
Nearest Ensembl:	ENSG00000164970
Gene Name:	FAM219A
Gene Alias:	C9orf25
Gene Description:	family with sequence similarity 219 member A
Gene Type:	protein-coding
CpG%:	0.145
GC%:	0.810945
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetail
-|all_trans=KJ895817:96 ENST00000379089.5:-186 ENST00000379087.5:-186 ENST00000379084.5:-186 ENST00000379081.5:-186 ENST00000379080.5:-186 ENST00000422409.5:-186 ENST00000379078.1:-186 uc064srz.1:-186 uc064ssa.1:-186 uc064ssb.1:-186 uc064ssc.1:-186 uc064ssd.1:-186 uc064sse.1:-186 uc064ssf.1:-186 AK299882:-199 ENST00000445726.5:-204 ENST00000297620.8:-204 NM_001184945:-204 NM_001184943:-204 NM_147202:-204 NM_001184942:-204 NM_001184941:-204 NM_001184940:-204 uc011lok.3:-204 uc003zuj.4:-204 AK123887:-204 BC041009:-204 AK096350:-204 AK294054:-204
+|all_trans=KJ895817:96 ENST00000379089.5:-186 ENST00000379087.5:-186 ENST00000379084.5:-186 ENST00000379081.5:-186 ENST00000379080.5:-186 ENST00000422409.5:-186 ENST00000379078.1:-186 AK299882:-199 ENST00000651358.1:-204 ENST00000445726.5:-204 ENST00000297620.8:-204 NM_001184945:-204 NM_147202:-204 NM_001184942:-204 NM_001184943:-204 NM_001184941:-204 NM_001184940:-204 AK123887:-204 BC041009:-204 AK096350:-204 AK294054:-204
 |chr=chr9
 |cpg_percent=0.145
@@ Line 14: / Line 14: @@
 |gene_type=protein-coding
 |nearest_ensembl=ENSG00000164970
-|nearest_promoter_id=NM_147202
+|nearest_promoter_id=NM_001184943
 |nearest_refseq=NM_147202
 |nearest_unigene=Hs.493771
-|num_trans=30
+|num_trans=22
 |species=human
 |start=34458359