TSS: Hg 100595.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance= | |distance=NA | ||
|distance_to_tss= | |distance_to_tss=1109 | ||
|end=35649826 | |end=35649826 | ||
|end_of_center_position=35649822 | |end_of_center_position=35649822 | ||
|entrez_id=27240 | |entrez_id=27240 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
|gene_alias=SIT | |gene_alias=SIT{{!}}SIT-R | ||
|gene_description=signaling threshold regulating transmembrane adaptor 1 | |gene_description=signaling threshold regulating transmembrane adaptor 1 | ||
|gene_name=SIT1 | |gene_name=SIT1 | ||
| Line 23: | Line 23: | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
|tss_classification= | |tss_classification=yes | ||
|tss_id=hg_100595.1 | |tss_id=hg_100595.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:47, 12 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1109 |
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| Nearest PromoterID: | NM_014450 |
| Entrez ID: | 27240 |
| Nearest Unigene: | Hs.88012 |
| Nearest Refseq: | NM_014450 |
| Nearest Ensembl: | ENSG00000137078 |
| Gene Name: | SIT1 |
| Gene Alias: | SIT|SIT-R |
| Gene Description: | signaling threshold regulating transmembrane adaptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |