TSS: Hg 100674.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
|distance= | |distance=NA | ||
|distance_to_tss=83 | |distance_to_tss=83 | ||
|end=36136624 | |end=36136624 | ||
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|entrez_id=152007 | |entrez_id=152007 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
|gene_alias=C9orf19 | |gene_alias=C9orf19{{!}}GAPR-1{{!}}GAPR1 | ||
|gene_description=GLI pathogenesis related 2 | |gene_description=GLI pathogenesis related 2 | ||
|gene_name=GLIPR2 | |gene_name=GLIPR2 | ||
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|start_of_center_position=36136618 | |start_of_center_position=36136618 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-35(CGCCTTATAAGG,-,0.00),-33(CCTTATAAGGAG,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 16:22, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 83 |
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| Nearest PromoterID: | NR_104639 |
| Entrez ID: | 152007 |
| Nearest Unigene: | Hs.493819 |
| Nearest Refseq: | NM_022343 |
| Nearest Ensembl: | ENSG00000122694 |
| Gene Name: | GLIPR2 |
| Gene Alias: | C9orf19|GAPR-1|GAPR1 |
| Gene Description: | GLI pathogenesis related 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(CGCCTTATAAGG,-,0.00),-33(CCTTATAAGGAG,+,0.00) |