TSS: Hg 100767.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|all_trans=MG828752:-15 | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance= | |distance=-15 | ||
|distance_to_tss=- | |distance_to_tss=-157801 | ||
|end=38227035 | |end=38227035 | ||
|end_of_center_position=38227029 | |end_of_center_position=38227029 | ||
| Line 16: | Line 17: | ||
|nearest_refseq=NM_003028 | |nearest_refseq=NM_003028 | ||
|nearest_unigene=Hs.521482 | |nearest_unigene=Hs.521482 | ||
|num_trans= | |num_trans=1 | ||
|species=human | |species=human | ||
|start=38227021 | |start=38227021 | ||
|start_of_center_position=38227028 | |start_of_center_position=38227028 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=MG828752 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100767.1 | |tss_id=hg_100767.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 15:27, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | -157801 |
|---|---|
| Nearest PromoterID: | NM_003028 |
| Entrez ID: | 6461 |
| Nearest Unigene: | Hs.521482 |
| Nearest Refseq: | NM_003028 |
| Nearest Ensembl: | ENSG00000107338 |
| Gene Name: | SHB |
| Gene Alias: | bA3J10.2 |
| Gene Description: | SH2 domain containing adaptor protein B |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |