TSS: Hg 100768.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=MG828752:0 | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance= | |distance=0 | ||
|distance_to_tss=- | |distance_to_tss=-157821 | ||
|end=38227058 | |end=38227058 | ||
|end_of_center_position=38227048 | |end_of_center_position=38227048 | ||
| Line 16: | Line 17: | ||
|nearest_refseq=NM_003028 | |nearest_refseq=NM_003028 | ||
|nearest_unigene=Hs.521482 | |nearest_unigene=Hs.521482 | ||
|num_trans= | |num_trans=1 | ||
|species=human | |species=human | ||
|start=38227037 | |start=38227037 | ||
|start_of_center_position=38227047 | |start_of_center_position=38227047 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=MG828752 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100768.1 | |tss_id=hg_100768.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 15:27, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -157821 |
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| Nearest PromoterID: | NM_003028 |
| Entrez ID: | 6461 |
| Nearest Unigene: | Hs.521482 |
| Nearest Refseq: | NM_003028 |
| Nearest Ensembl: | ENSG00000107338 |
| Gene Name: | SHB |
| Gene Alias: | bA3J10.2 |
| Gene Description: | SH2 domain containing adaptor protein B |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |