TSS: Hg 100438.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-2433 |entrez_id=101929639 |gc_percent=0.452736 |gene_alias=- |gene_description=B4GALT1 antisense RNA 1 |gene_name=B4GALT1-AS1...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=NA | |||
|distance_to_tss=-2433 | |distance_to_tss=-2433 | ||
|end=33164531 | |||
|end_of_center_position=33164516 | |||
|entrez_id=101929639 | |entrez_id=101929639 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| Line 9: | Line 13: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl=ENSG00000233554 | |nearest_ensembl=ENSG00000233554 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_108109 | ||
|nearest_refseq=NR_108108 | |nearest_refseq=NR_108108 | ||
|nearest_unigene=Hs.545818 | |nearest_unigene=Hs.545818 | ||
|num_trans=0 | |||
|species=human | |||
|start=33164499 | |||
|start_of_center_position=33164515 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100438.1 | |tss_id=hg_100438.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 15:19, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -2433 |
|---|---|
| Nearest PromoterID: | NR_108109 |
| Entrez ID: | 101929639 |
| Nearest Unigene: | Hs.545818 |
| Nearest Refseq: | NR_108108 |
| Nearest Ensembl: | ENSG00000233554 |
| Gene Name: | B4GALT1-AS1 |
| Gene Alias: | - |
| Gene Description: | B4GALT1 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |