TSS: Hg 101116.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| Line 4: | Line 4: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance= | |distance=NA | ||
|distance_to_tss=157136 | |distance_to_tss=157136 | ||
|end=81532401 | |end=81532401 | ||
| Line 10: | Line 10: | ||
|entrez_id=7088 | |entrez_id=7088 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
|gene_alias=ESG | |gene_alias=ESG{{!}}ESG1{{!}}GRG1 | ||
|gene_description= | |gene_description=TLE family member 1, transcriptional corepressor | ||
|gene_name=TLE1 | |gene_name=TLE1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000196781 | |nearest_ensembl=ENSG00000196781 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001303103 | ||
|nearest_refseq=NM_005077 | |nearest_refseq=NM_005077 | ||
|nearest_unigene=Hs.197320 | |nearest_unigene=Hs.197320 | ||
| Line 23: | Line 23: | ||
|start_of_center_position=81532399 | |start_of_center_position=81532399 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-34(GCCCATAAAAAG,-,0.00),-32(CCATAAAAAGAG,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:32, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 157136 |
|---|---|
| Nearest PromoterID: | NM_001303103 |
| Entrez ID: | 7088 |
| Nearest Unigene: | Hs.197320 |
| Nearest Refseq: | NM_005077 |
| Nearest Ensembl: | ENSG00000196781 |
| Gene Name: | TLE1 |
| Gene Alias: | ESG|ESG1|GRG1 |
| Gene Description: | TLE family member 1, transcriptional corepressor |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(GCCCATAAAAAG,-,0.00),-32(CCATAAAAAGAG,+,0.00) |