TSS: Hg 101187.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |distance=NA | ||
|distance_to_tss=230869 | |distance_to_tss=230869 | ||
|end=85511165 | |end=85511165 | ||
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|entrez_id=23287 | |entrez_id=23287 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
|gene_alias=CCP1 | |gene_alias=CCP1{{!}}CONDCA{{!}}NNA1 | ||
|gene_description=ATP/GTP binding protein 1 | |gene_description=ATP/GTP binding protein 1 | ||
|gene_name=AGTPBP1 | |gene_name=AGTPBP1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000135049 | |nearest_ensembl=ENSG00000135049 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001286717 | ||
|nearest_refseq=NM_015239 | |nearest_refseq=NM_015239 | ||
|nearest_unigene=Hs.719980 | |nearest_unigene=Hs.719980 | ||
| Line 22: | Line 22: | ||
|start_of_center_position=85511159 | |start_of_center_position=85511159 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-69(CCTCTTATGGTG,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:34, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 230869 |
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| Nearest PromoterID: | NM_001286717 |
| Entrez ID: | 23287 |
| Nearest Unigene: | Hs.719980 |
| Nearest Refseq: | NM_015239 |
| Nearest Ensembl: | ENSG00000135049 |
| Gene Name: | AGTPBP1 |
| Gene Alias: | CCP1|CONDCA|NNA1 |
| Gene Description: | ATP/GTP binding protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -69(CCTCTTATGGTG,+,0.00) |