TSS: Hg 101267.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance= | |distance=NA | ||
|distance_to_tss=-563 | |distance_to_tss=-563 | ||
|end=88534568 | |end=88534568 | ||
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|entrez_id=158046 | |entrez_id=158046 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
|gene_alias=C9orf121 | |gene_alias=C9orf121{{!}}RDCVF2{{!}}RdCVF2L | ||
|gene_description=nucleoredoxin | |gene_description=nucleoredoxin like 2 | ||
|gene_name=NXNL2 | |gene_name=NXNL2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000130045 | |nearest_ensembl=ENSG00000130045 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001161625 | ||
|nearest_refseq=NM_145283 | |nearest_refseq=NM_145283 | ||
|nearest_unigene=Hs.734507 | |nearest_unigene=Hs.734507 | ||
| Line 23: | Line 23: | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
|tss_classification= | |tss_classification=yes | ||
|tss_id=hg_101267.1 | |tss_id=hg_101267.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:00, 12 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -563 |
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| Nearest PromoterID: | NM_001161625 |
| Entrez ID: | 158046 |
| Nearest Unigene: | Hs.734507 |
| Nearest Refseq: | NM_145283 |
| Nearest Ensembl: | ENSG00000130045 |
| Gene Name: | NXNL2 |
| Gene Alias: | C9orf121|RDCVF2|RdCVF2L |
| Gene Description: | nucleoredoxin like 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |