TSS: Hg 101678.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance= | |distance=NA | ||
|distance_to_tss= | |distance_to_tss=6755 | ||
|end=98248909 | |end=98248909 | ||
|end_of_center_position=98248895 | |end_of_center_position=98248895 | ||
|entrez_id=55357 | |entrez_id=55357 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
|gene_alias=PARIS-1 | |gene_alias=PARIS-1{{!}}PARIS1{{!}}TBC1D2A | ||
|gene_description=TBC1 domain family member 2 | |gene_description=TBC1 domain family member 2 | ||
|gene_name=TBC1D2 | |gene_name=TBC1D2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000095383 | |nearest_ensembl=ENSG00000095383 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_051978 | ||
|nearest_refseq=NM_018421 | |nearest_refseq=NM_018421 | ||
|nearest_unigene=Hs.371016 | |nearest_unigene=Hs.371016 | ||
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|start_of_center_position=98248894 | |start_of_center_position=98248894 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-27(CTGCTTTTAAGG,-,0.00),-25(GCTTTTAAGGAT,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:45, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 6755 |
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| Nearest PromoterID: | NR_051978 |
| Entrez ID: | 55357 |
| Nearest Unigene: | Hs.371016 |
| Nearest Refseq: | NM_018421 |
| Nearest Ensembl: | ENSG00000095383 |
| Gene Name: | TBC1D2 |
| Gene Alias: | PARIS-1|PARIS1|TBC1D2A |
| Gene Description: | TBC1 domain family member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -27(CTGCTTTTAAGG,-,0.00),-25(GCTTTTAAGGAT,+,0.00) |