TSS: Hg 102544.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance= | |distance=NA | ||
|distance_to_tss= | |distance_to_tss=29512 | ||
|end=127539573 | |end=127539573 | ||
|end_of_center_position=127539562 | |end_of_center_position=127539562 | ||
|entrez_id=64855 | |entrez_id=64855 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
|gene_alias=C9orf88 | |gene_alias=C9orf88{{!}}FAM129B{{!}}MEG-3{{!}}MINERVA{{!}}OC58{{!}}bA356B19.6 | ||
|gene_description= | |gene_description=niban apoptosis regulator 2 | ||
|gene_name= | |gene_name=NIBAN2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000136830 | |nearest_ensembl=ENSG00000136830 | ||
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|start_of_center_position=127539561 | |start_of_center_position=127539561 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-43(CCATTTTAAAGG,-,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 17:06, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 29512 |
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| Nearest PromoterID: | NM_022833 |
| Entrez ID: | 64855 |
| Nearest Unigene: | Hs.522401 |
| Nearest Refseq: | NM_022833 |
| Nearest Ensembl: | ENSG00000136830 |
| Gene Name: | NIBAN2 |
| Gene Alias: | C9orf88|FAM129B|MEG-3|MINERVA|OC58|bA356B19.6 |
| Gene Description: | niban apoptosis regulator 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -43(CCATTTTAAAGG,-,0.00) |