TSS: Hg 100456.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.08 |distance_to_tss=477 |entrez_id=4799 |gc_percent=0.656716 |gene_alias=NFX2|TEG-42|Tex42 |gene_description="nuclear transcription factor, X-box bi...") |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|TEG-42= | |||
|Tex42= | |||
|chr=chr9 | |||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=378 | |||
|end=33290901 | |||
|end_of_center_position=33290894 | |||
|entrez_id=4799 | |entrez_id=4799 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
|gene_alias=NFX2 | |gene_alias=NFX2{{!}}TEG-42{{!}}Tex42 | ||
|gene_description= | |gene_description=nuclear transcription factor, X-box binding 1 | ||
|gene_name=NFX1 | |gene_name=NFX1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000086102 | |nearest_ensembl=ENSG00000086102 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001318758 | ||
|nearest_refseq=NM_002504 | |nearest_refseq=NM_002504 | ||
|nearest_unigene=Hs.413074 | |nearest_unigene=Hs.413074 | ||
|num_trans=0 | |||
|species=human | |||
|start=33290886 | |||
|start_of_center_position=33290893 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100456.1 | |tss_id=hg_100456.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:17, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | 378 |
---|---|
Nearest PromoterID: | NM_001318758 |
Entrez ID: | 4799 |
Nearest Unigene: | Hs.413074 |
Nearest Refseq: | NM_002504 |
Nearest Ensembl: | ENSG00000086102 |
Gene Name: | NFX1 |
Gene Alias: | NFX2|TEG-42|Tex42 |
Gene Description: | nuclear transcription factor, X-box binding 1 |
Gene Type: | protein-coding |
CpG%: | 0.08 |
GC%: | 0.656716 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |